Agree with the info supplied above.
Just a note: The engine can run with the cams off a tooth, but it will not run right.
You are right to want to double check it. (although as mentioned above, it may well be fine)
A compression check will help you know, (although with your brand new unbedded pistons it may read a little low, but it should read consistant)
Also you can pull the valve cover and watch the alignment marks carefully.
As mentioned above, no grinding shims. Just replace them. shim kits are helpful, and remember that in general as valves wear they tighten up to the cam, so look at the clearance window and if you can, lean toward the loose side of that window with a new engine. Stay within spec, but if your shim choices put you either right at the tight side of spec or smack in the middle, take the middle every time. This isn't a drag motor.
But again, as mentioned above the most likely culprit is the carbs.
You may need to raise the needle a notch to get the crossover range right. Also, double check your fuel flow. A clogged petcock or tank vent can result in inadequate flow that will give you similar symptoms.
Good luck!