I recieved a request for more details.
I swapped handlebars and at the same time was going to install a hydraulic clutch so the clutch cable came off, I also took off the side cover and used another side cover that I had already tapped threads into. I ran into issues with the hydraulic clutch (unimportant for this thread) and installed my original side cover and clutch cable, no adjustments were done.
That is all before the test run, in which I could only shift to 3rd and the engine ran like I was holding in the clutch some, ie. not fully disengaging.
That is when I adjusted it according to the book. I loosened the lock nut and tightened the adjuster screw until I hit resistance then backed it off 1/4 turn. That gave me the ability to not shift at all, and some internet research. I have tried lubing the cable and the cable felt easier to pull but still could not shift.
I have a replacement hydraulic clutch on the way but would like to get it working correctly before I install that one, for peace of minds sake. And it will help me learn my system.
Thanks for the help.